Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811400.1_cds_XP_016496710.1_10904
CDS Infomation

[gene=LOC107815615] [db_xref=GeneID:107815615] [protein=DNA repair protein UVH3-like] [protein_id=XP_016496710.1] [location=complement(join(18901..19590,20291..20818,21081..21165,21253..21389,21484..21760,21962..22047,22412..22606,24236..25919,26018..26202,26662..26715,26835..26912,27434..27551,27684..27853,28348..28598,28696..28783))] [gbkey=CDS]
Sequence

ATGGGTGTTCAAGGTCTCTGGGAGCTCTTGGCCCCCGTCGGCCGCCGCGTGTCCGTTGAA
ACCCTCGCCGGAAAAAAACTAGCAATCGATGCAAGCATATGGATTATACAATTTATGAAA
GCAATGCGAGATGAAAAGGGGGAGATGGTGCGGAATGCTCATATTTTGGGATTTTTCCGT
CGAATTTGCAAGTTACTCTACCTTCGGACCAAGCCAGTCTTTGTATTTGACGGTGGTACG
CCTGCCCTCAAGCGTAGAACGGTGATCGCGCGTCGCCGCCAGCGGGAAAATGCTCAAGCC
AAGATTAGAAAAACTGCTGAAAAATTGCTCCTTAATCATCTTAAGGCTATGAGGCTGAAA
GAGCTGGCTGTGGATCTGGAGAACCAGAGGAAGCAGAATGATGCAAAGGGTAAAAAGGTT
AGCACAGAAGCAACTGGAACTGTGAAGAACGTGGACGAAGGAAATGGCTTGGCTGCAGAG
AATTATGATAGGGAAGCACTGGATGAGATGTTGGCAGCTTCTATTCAAGCAGAGGAAGAC
TGGAATTTTACTGGTAATGCATCAACATCTTGTGCTGGGGATCATGCTGAAAATGATAAC
ACTGATGAAGACGAAGAGATGATACTGCCATCAATGCAAGGAAAAGTTGATCCTTCTGTT
TTAGCTGCTTTACCTCCATCGATGCAGCTTGATCTTCTTGGTCAGATGAGGGAGAGATTG
ATGGCAGAGAACAGACAAAAGTATCAGAAGGTCAAGAAGGCTCCTGAAAAGTTCTCAGAA
CTGCAAATACAAGCTTATCTGAAAACTGTTGCTTTTCGACGCGAGATAGATGAAGTGCAG
AAATCTGCTGCTGGAAAGGGAATAGGTGGTGTGCGGACTAAAAGGATTGCTTCTGAAGCA
AATAGGGAATTTATTTTCTCCTCATCTTTTACTGGGGACAAAGATGTCCTTGTGTCTGCT
GGGAAAGATCAAACCAGAAAGAAGCCAAGTGAAGTACAAACAGAAAATAGTTTGCCAAAT
TCTGCGACTGCAAGTGATGCTGCAACAAGGAAATCTAGTGTGCTAGAATCAATCGTGACT
GAACCTGGAAGTGCATTTAATGATGACGTGGAGACGTATCTGGATGAGAGGGGTCATCTT
CGAGTCAGCAGACTGAGAGCCATGGGTGTTCGCATGACTCGAGATTTACAGAGAAATTTA
GATATGATTAAAGAGATTGAGGAAGAGAGTCTATCCAGAAACAAAGATTTTAGTTATGTG
CCTGCTATCAATGACACTGCTGTACATTCCCCTGGAAATGTCTCTGATACAATTCCGCAG
CTGAACTCATCCAATCCAGATAATGATGGGAAGGCTTGTTCAAACAACAAAAGTGAAGAG
TCTGAGTTGAAAAGCGGGACTTCAATTCAGATATCTTTTGAAGATAATTTTGCACATAAT
TGTGCCAATGATGATGATGATGATATATTTGCACATTTAGTGGCAGGTGATCCAGCTATG
GAATTTTCTATTGATCATTCCCCCTCAAAAAAGCAGTCTCTGGATTCTGCCTCAGATGTT
GAGTGGGAGGAAGGATTGATTGAAGAGAAACGTGACTTGCTAAGCAATAACTCTCAAGGG
GAAAGCCAGGCTACACTGGAGAAAGATGGCATGGATGATGAGGTTGAAGTAGAATGGGAA
GAAGAATGTGTAGATATTTGCAAGGAGCGTTCCTTATTTCCATTTGATTCAAGAAGTGCT
TCTAAAGGTGCTTTGGAAGAAGAAGCGGATTATCAGGAAGCAGTAAGGAGGAGTCTTGAG
GACTTGAGAGATCATAGATGCATAGATAAATCTCATGAGAATGATATGTCTGAAGAAGCT
AGTCAAATGGTTACTCATGGTATAGTTATTGGATCTGATGGTCAAGATAACAATTGTCCA
AAGACGCATGAAATTCTTCAACAGAAAGAATTACCATCCGAAATTCAGACTGCACACTTG
CATGATACTGTACATGAGACGGATATTGCGGAGGGTAATAACTGTTTGGGAAACCAGTTA
GGGGAACAATTTCAAGCTAATTCTGGTTATAGAAATATGCAGATTGAAGAAGTAACCAAT
CAAGCTGACAGAACTTTGCATTGTGATATACGTATGGGACCGACTGATCCTCTTGATGGG
TCAGAGGTTAGAATGATTAGGAATAAGATAGCTGATACCACTGTTGAGGTTTCGAGCAAC
GGAAAAAGTGCGTCAGATGTTACTTCTATAGAACAAGCAAGATTTAACGAATTGCCGAAT
GCAAGAACCTCTGATGCTCAACAATATGAAGCTGGAGCTGCCTCACATCATTATACACAT
GAATCGACAGAACTCGCCAAAGCTTTCACGGAGGGTTTTATAAGTGATGCAAATAGTGCA
CAAAAACTAGATGAGGAAGGTACTTGTGATGACCCATTATTGGAAGGGAAGGATCTCTTT
GGCAATTTGGATTCTGCAGGTAGCAAAGAAGATCAAAAGGTTATGATGGCTAGTTTGGAG
GAGGAGATGGATGTGTTGGATAAAGAGCGTGAAAAACTTGGAGATGAGCAGAGAAAGCTT
GAGCGTAATGCAGAATCTGTAAGCTCTGAAATGTTTGCAGAGTGCCAGGAGTTGCTTCAA
ATGTTTGGCTTGCCATATATAATAGCTCCGATGGAAGCTGAAGCTCAGTGTGCTTACATG
GAGCTTACAAATCTTGTTGATGGTGTGGTTACTGATGACTCTGATGCGTTCTTGTTTGGT
GCTCGAAATGTATACAAGAACATATTTGATGATCGCAAATATGTGGAGACATACTTTATG
AAGGATGTGGAGAACGAGCTTGGGTTGGATAGAGAAAAATTAATTCGTACGGCATTATTC
CTTGGGAGCGATTATACTGAAGGAGTGAGTGGGATTGGTATTGTTAATGCCATTGAAGTT
CTAAATGCATTTCCTGAGGAAGACGGTCTTCAGAAATTTCGGGAGTGGGTGGAATCGCCA
GATCCATCCATTCTTGGGGGGCTTGATGCACAGGCAGGTTCCAGCACTAGGAAGAGAGGG
AGTGAAGTTGGTGATCCAGATATGAGTTGCTCAAGAAGCAATGTGGAAGGCAATTCCGCA
TCTGATGAAAATGTCAAGTCTGAGGATAGAGTTCAAAAGTTGAAGCAGATTTTCATGAAT
AAACATAGAAATATTAGTAAAAACTGGCATATTCCTTCCTCGTTTCCGAGTGATGCTGTG
ATTTCAGCATATGCTTCTCCACGGGTTGACAAGTCAACAGAGCATTTTGCATGGGGGAAG
CCTGATGTTTCTGTGCTTCGCAAAGTTTGTTGGGAGAAATTCGGTTGGAGCAGCCAGAAG
GCAGATGAATTGCTAGTATCGGTTCTGAAAGAGTACAACAAACATGAGACACAACTTCGA
CTGGAAGCCTTCTACACTTTCAATGAGAGATTTGCAAAAATTCGTAGCAAGAGGATAAAA
AAGGCTGTTAAACTTATGACAGGAAACAAATCCATGAATTTAATGGATGCAAGTGTACAA
GATGCTCCTGAAAACTTAAAAAAAAGAGAATTAAAATTTAATAATGTGGAGGAGGAAAAG
ATAGAGGATCCTTTGACGGGACTAGAGTCGGCTGGTGCTGATTATGAGGAGACAAAAACA
AAAAGATCAGTTGGAAAGCAGTCAAGAAAAAGGAAAGGAGAGCATTTGCAGCCTGAACAT
TTGGAACCACCAGAGGGATCAGGAAGCAAGCAAAACACCAATAAGAAATCAAGTGGTAGT
ATAAGAGGAGGGAGGAAAACAGCTCGATCTGTGGGGAAGGCAAGTAAGAAATCCTGTTCC
AGATCCTTCAAAACAAGCTCCGAGGGGGAAAAAGATAGTGATATAGAGCAACAATCACAA
ATTGAGAAGCTTGAAAAGCCAAAGCAAGCAAGAAGATCAGAGCGTCATCGGAAAATAGTA
AATTACAGTGAGGGAAGAGATGATGAGTCTGATAAAGTTGACAAAGATGATGGAGATTCT
ACTACTGACAAGTTGGAAAGGAGAGAATCCGGAGCAGATGTGGGCATAGTTGAGCGTTGT
CCTGATGATTCTAGCAACATGACCGAGAATGATGTAAGTAATGATTACTGTCCACAAGGA
CTGTCAAACCCTGAAACAAGTGCTGATGTCAACACGGGTGGGGCAGAAATGGAATCCGCT
GTTCAGCCAAGTTTTGGTGAAATGGACGATCCTGTTCCTGGGGATCTTTTGTCTAAGGAG
TACCTTAAAATGGGGGGTGGGTTTTGCTTAGAGGAAGATGATGGAGATATGGAGCATGAG
ATAAATGCGTCTAGTCCTATCCTATCAGTTGGTTGTTCTGATATTAATAATTCCTCTCAG
CTTTTGGGAAATGAGATTTGTGGTAATGCTTCAAATCAGTTTGTTTCTAGCCCCTCGACG
AATAAAAAGCAATGTGATGCAAGGATAGGTGCATCTGAAAACGAGCAAGATTTAGACAAC
ACGACTAATAGTACTTGTCAAAAGGTATCAGCGCACCAAGAAAATATGGAGGACAATGAT
TATGTTTCCGGTTCGGTGTTTCTTCGTGCAATGCCAAATTTGAGGAAGCGGAAGAAGAAT
AGCTGA

Peptide Sequence

PEP ID

XP_016496710.1
PEP Infomation

PREDICTED: DNA repair protein UVH3-like [Nicotiana tabacum]
Sequence

MGVQGLWELLAPVGRRVSVETLAGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK
ELAVDLENQRKQNDAKGKKVSTEATGTVKNVDEGNGLAAENYDREALDEMLAASIQAEED
WNFTGNASTSCAGDHAENDNTDEDEEMILPSMQGKVDPSVLAALPPSMQLDLLGQMRERL
MAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKSAAGKGIGGVRTKRIASEA
NREFIFSSSFTGDKDVLVSAGKDQTRKKPSEVQTENSLPNSATASDAATRKSSVLESIVT
EPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIEEESLSRNKDFSYV
PAINDTAVHSPGNVSDTIPQLNSSNPDNDGKACSNNKSEESELKSGTSIQISFEDNFAHN
CANDDDDDIFAHLVAGDPAMEFSIDHSPSKKQSLDSASDVEWEEGLIEEKRDLLSNNSQG
ESQATLEKDGMDDEVEVEWEEECVDICKERSLFPFDSRSASKGALEEEADYQEAVRRSLE
DLRDHRCIDKSHENDMSEEASQMVTHGIVIGSDGQDNNCPKTHEILQQKELPSEIQTAHL
HDTVHETDIAEGNNCLGNQLGEQFQANSGYRNMQIEEVTNQADRTLHCDIRMGPTDPLDG
SEVRMIRNKIADTTVEVSSNGKSASDVTSIEQARFNELPNARTSDAQQYEAGAASHHYTH
ESTELAKAFTEGFISDANSAQKLDEEGTCDDPLLEGKDLFGNLDSAGSKEDQKVMMASLE
EEMDVLDKEREKLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM
ELTNLVDGVVTDDSDAFLFGARNVYKNIFDDRKYVETYFMKDVENELGLDREKLIRTALF
LGSDYTEGVSGIGIVNAIEVLNAFPEEDGLQKFREWVESPDPSILGGLDAQAGSSTRKRG
SEVGDPDMSCSRSNVEGNSASDENVKSEDRVQKLKQIFMNKHRNISKNWHIPSSFPSDAV
ISAYASPRVDKSTEHFAWGKPDVSVLRKVCWEKFGWSSQKADELLVSVLKEYNKHETQLR
LEAFYTFNERFAKIRSKRIKKAVKLMTGNKSMNLMDASVQDAPENLKKRELKFNNVEEEK
IEDPLTGLESAGADYEETKTKRSVGKQSRKRKGEHLQPEHLEPPEGSGSKQNTNKKSSGS
IRGGRKTARSVGKASKKSCSRSFKTSSEGEKDSDIEQQSQIEKLEKPKQARRSERHRKIV
NYSEGRDDESDKVDKDDGDSTTDKLERRESGADVGIVERCPDDSSNMTENDVSNDYCPQG
LSNPETSADVNTGGAEMESAVQPSFGEMDDPVPGDLLSKEYLKMGGGFCLEEDDGDMEHE
INASSPILSVGCSDINNSSQLLGNEICGNASNQFVSSPSTNKKQCDARIGASENEQDLDN
TTNSTCQKVSAHQENMEDNDYVSGSVFLRAMPNLRKRKKNS

Transcript Sequence

Gene sequence data has not been registered.